BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005E11LP1|AL425393
(1062 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1804 2020 0.0
>3x_Contig1804
Length = 51183
Score = 2020 bits (1017), Expect = 0.0
Identities = 1053/1063 (99%), Gaps = 3/1063 (0%)
Strand = Plus / Minus
Query: 1 acactttacttatcccgattaaagaacacacatattccatgggcactggtacccattaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6754 acactttacttatcccgattaaagaacacacatattccatgggcactggtacccattaaa 6695
Query: 61 gacattgtatccaaccatcgcatcttctggccgtttttttcattcacttgtataatattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6694 gacattgtatccaaccatcgcatcttctggccgtttttttcattcacttgtataatattt 6635
Query: 121 accaatatatacacattagcaatgcagaacacagtcactaacgaatacagaccaataact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6634 accaatatatacacattagcaatgcagaacacagtcactaacgaatacagaccaataact 6575
Query: 181 ttacaacacttatattacggctgtacaagttcagccttattcgactgagtttacacattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6574 ttacaacacttatattacggctgtacaagttcagccttattcgactgagtttacacattt 6515
Query: 241 cagccggtcgtgctttactattcctatcgtaaacggttctaatgtttttctcttccatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6514 cagccggtcgtgctttactattcctatcgtaaacggttctaatgtttttctcttccatgc 6455
Query: 301 tgcttaaragttgagacgacagcataatttcttttctattgtgaactgttcaatacggac 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6454 tgcttaaaagttgagacgacagcataatttcttttctattgtgaactgttcaatacggac 6395
Query: 361 cgcataaaacaagaaagtaattgacagtgtatctgacagcgtatcaaggaaatgcattat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6394 cgcataaaacaagaaagtaattgacagtgtatctgacagcgtatcaaggaaatgcattat 6335
Query: 421 cccaatattcagttatgcaactttaacatctaaagctagtagaagaatgcacttgcttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6334 cccaatattcagttatgcaactttaacatctaaagctagtagaagaatgcacttgcttca 6275
Query: 481 gtaaaagtcaattgatggcaccgtttgtattactccgttgctcttgttaattgtgtaatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6274 gtaaaagtcaattgatggcaccgtttgtattactccgttgctcttgttaattgtgtaatc 6215
Query: 541 gtgtcgtgccctctactgttttgacaaaatcggatgtttcaagcctacttattcatccaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6214 gtgtcgtgccctctactgttttgacaaaatcggatgtttcaagcctacttattcatccaa 6155
Query: 601 gctgcttgacacaaaagacttgaggctaagaatatcagagtgacagagtgaattgatcag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6154 gctgcttgacacaaaagacttgaggctaagaatatcagagtgacagagtgaattgatcag 6095
Query: 661 aggccaaaagaaaccgagacttcactatttactgtcatgtctagcttccttttttttttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6094 aggccaaaagaaaccgagacttcactatttactgtcatgtctagcttccttttttttttt 6035
Query: 721 tttttttttaatgcctgagaracggaatggcagccgttgatagtaatttacagatacatt 780
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 6034 tttttttttaatgcctgagaaacggaatggcagccgttgatagtaatttacagatacatt 5975
Query: 781 tatagagatatacaaaaattactgattaatttagaacagccatgtgtttgacacagtaga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5974 tatagagatatacaaaaattactgattaatttagaacagccatgtgtttgacacagtaga 5915
Query: 841 tggcaaaaaattaattacaaggccccttgtataggccgaaatacttgtgaactttgctcg 900
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5914 tggc-aaaaattaattacaaggccccttgtataggccgaaatacttgtgaactttgctcg 5856
Query: 901 tgcaagattttgcttgtagagtataaattgtgaaaattatcaacaaggcaatcaactact 960
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5855 tgcaacgatttgcttgtagagtataaattgtgaaaattatcaacaaggcaatcaactact 5796
Query: 961 ccctaattttatagtgttaaccccatactgttttccatttagctttcacgaaggaagaaa 1020
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5795 ccctaa-tttatagtgttaaccccatactgttttccatttagctttcacgaaggaagaaa 5737
Query: 1021 atagaagccagttagatcggctaggg-gtctgctamaatttca 1062
|||||||||||| ||||||||||||| |||||||| |||||||
Sbjct: 5736 atagaagccagtaagatcggctagggcgtctgctacaatttca 5694
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 21,905
Number of Sequences: 1807
Number of extensions: 21905
Number of successful extensions: 4054
Number of sequences better than 1.0e-20: 1
length of query: 1062
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1046
effective length of database: 10,329,639
effective search space: 10804802394
effective search space used: 10804802394
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)